Mackereth Lab IECB | Bordeaux | France

Home Bordeaux IECB The Lab Publications Structures Links Internal


WELCOME to the Mackereth
NMR group

Cameron Mackereth
The lab is focussed on the structural details of how proteins and nulceic acids come together to form complexes. We use a combination of biochemical methods to probe the way in which the pieces of these biomolecules are assembled, but our main technique is nuclear magnetic resonance (NMR) spectroscopy. 

NOESY Structure-4 Structure-3 Structure-2 Structure-1 Structure



Research Overview

There is increasing evidence in support of a model of cellular biochemistry in which most proteins exert their biological role through either transient or relatively stable multi-component macromolecular complexes. The key to understanding the function of these complexes lies in their structural investigation by a variety of biophysical methods. The lab studies molecular details of large protein-nucleic acid macromolecules using a variety of new NMR techniques as well as established biophysical approaches. For large complexes, we utilize a rigid body assembly of individually characterized structures using a combination of methods: domain orientation through the measurement of residual dipolar coupling (RDC) by NMR spectroscopy, overall shape determination by small angle neutron or X-ray scattering (SANS/SAXS), and incorporating molecular contact details from such techniques as NMR paramagnetic spin labelling to acquire information on long-range contacts, as well as in vitro mutational analysis and other binding assays. For smaller proteins and domains, standard NMR-based approaches are used, but with additional insight gained from RDC and spin label information. Equally important to the lab is the traditional strength of NMR as a tool to probe the dynamics of biological samples, the characterization of transient interactions, and the possibility to look at structures that exhibit a significant amount of unstructured elements.

Current projects include:

Proteins involved in RNA processing, especially alternative splicing.

Modification of histones. 



*************************************************  NEWS  ***********************************************

We welcome new postdoc Xiaoqian Xu to the group.

She will work on the structure of domains involved in 3'-end processing of pre-mRNA, in collaboration with our neighbours
Sébastien Fribourg and Lionel Minvielle-Sébastia


In the French press : L'IECB, institut de recherche basé à Pessac (33), réunit des biologistes et des chimistes.

Read the article (in French) from the newspaper Sud-Ouest
Cancer teams at IECB


Previous News Highlights




****************************************  RECENT PUBLICATIONS  **************************************


Reviewing the latest developments to understand the mechanisms by which multiple RNA-binding domains interact with their single-stranded or doule-stranded RNA targets. Focussing mainly on the the important role of solution biophysical techniques coupled with high-resolution structural information from NMR and X-ray.
Mackereth, C.D., Sattler, M. 20112. Dynamics in multi-domain protein recognition of RNA. Curr. Opin. Struct. Biol. [Epub ahead of print]
Curr Opin Struct Biol

PubMed


All Publications


***************************************************************************************************


Home
Bordeaux IECB The Lab Publications
Structures
Links Internal
Home Bordeaux IECB The Lab Publications Structures Links Internal